Hi,... My main concern is that it doesn't really seem to me that a lot of the existing deck plans really demonstrate that this is what's intended. ... In addition to this, ... many/most of these spaces really don't appear to show any form of fresh water supply in them which to me kind of seems problematic. ...
The others have dealt with the bulkhead verses interior partition issue. As regards the details of the deck plan, I think you've answered your own question. Clearly there are freshers and plumbing (and stoves or some means of preparing food, and pantries/fridges or some means of storing food, and sinks/dishwashers and trash cans or some means of cleaning dinnerware/kitchenware and dealing with refuse, and laundry machines, and so forth). Just as clearly, they're not on the deckplan. The deckplans offer a rough layout of the ship, not a detailed blueprint. It is for the gamemaster to fill in the needed details.