If we are getting petty:
Hull cost not correct. Example a custom 200 Dton hull with configuration 6 (streamlined) and scoops is calculated to MCr 20. It should be MCr 22 according to LBB2 or MCr 16.2 according to LBB5.
Not allowing mixing standard and custom drives is, as far as I can see, a house rule.
Fuel is not optional. You must have a full load (or more) of fuel according to the rules. No warning for insufficient fuel is given.
Demountable or Collapsible tanks not available.
Turret allocation of batteries is incorrect:
Two batteries correctly allocated to one dual turret. Exactly one hardpoint should be free, not 1.17.
Two such turrets incorrectly calculated, should be 4 Dton total. No hardpoint should be free.
This combination should not be possible, no warning given. Two double turrets plus an extra sandcaster not allowed.
The mixed Fusion+Sand turret incorrectly calculated, should be 2 Dton, not 3 Dton.
With more than 10 turrets, no mixed turrets allowed. The Fusion and Sandcaster takes one turret each. No hardpoints should be free.
Any type of spinal of the current TL or less should be selectable, not just of the max TL.
Empty bay not possible to allocate.
Cost of bays not calculated, MCr 1 for 100 Dton bay and MCr 0.5 for 50 Dton bay.
Gunnery crew not correctly allocated.
Small ship with two mixed turrets gets no gunners.
1000 Dton ship with 10 turrets (see above) gets 11 gunners, should be 10.
1100 Dton ship with the same 10 turrets gets 12 gunners, should be 15.
LBB5 crew not correctly calculated (1100 Dton ship):
The Command section should have 7 officers + 50% ratings = 10 or 11 personnel.
Security troops are optional, should be adjustable.
Stewards and medics are not needed in addition to the service crew, using both LBB5 and LBB2 requirements.
Frozen Watch drop down not sufficient, if you want frozen watches to survive a meson hit you generally want more frozen watches, one or three is not sufficient. Just having one frozen watch is not very useful.
Stateroom allocation incorrect, each crew section head should get a separate stateroom (200 Dton ship), not all officers:
Launch tube input not sufficient: You might want several sizes of launch tubes, say, one for small fighters and one for larger craft.